Cottage Cheese Bagels with Almond Flour – Easy, Chewy & Grain-Free

By :

Jack

July 10, 2025

Cottage cheese bagels with almond flour on rustic table

Cottage cheese bagels with almond flour are a game-changer for anyone craving that classic chew without the carbs or gluten. This recipe brings together rich, creamy cottage cheese and nutty almond flour to create a bagel that’s high in protein, low in carbs, and full of comfort.

Whether you’re new to grain-free baking or just want something quick and wholesome, these bagels deliver. In this post, we’ll cover everything—from the story behind the recipe to baking secrets and tasty variations. Let’s dig into the kind of breakfast that feeds both your hunger and your soul.

Cottage cheese bagels with almond flour on rustic table
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Cottage Cheese Bagels with Almond Flour

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These grain-free cottage cheese bagels made with almond flour are high-protein, low-carb, and deeply comforting. Perfect for quick breakfasts or prep-ahead meals, they’re chewy, rich, and endlessly customizable.
Prep Time 10 minutes
Cook Time 20 minutes
Total Time 30 minutes
Servings: 6 bagels
Course: Breakfast
Cuisine: American
Calories: 165

Ingredients
  

  • 1 cup almond flour
  • 1 cup full-fat cottage cheese
  • 2 large eggs
  • 1 tsp baking powder
  • 1 pinch salt
  • 1 egg, beaten (for brushing)
  • optional toppings: everything bagel seasoning, sesame seeds, shredded cheese

Equipment

  • mixing bowl
  • spoon or spatula
  • baking sheet
  • parchment paper
  • oven

Method
 

  1. Preheat oven to 375°F (190°C) and line a baking sheet with parchment paper.
  2. In a bowl, mix almond flour, baking powder, and salt. Stir to combine.
  3. Add cottage cheese and eggs to the dry mixture. Mix until a thick dough forms.
  4. Wet your hands and divide the dough into 6 portions. Roll each into a ball, then poke a hole in the center and shape into a ring.
  5. Place shaped bagels onto the prepared baking sheet. Brush tops with beaten egg and add optional toppings if desired.
  6. Bake for 18–22 minutes until golden brown. Let cool for 10 minutes before serving.

Nutrition

Calories: 165kcalCarbohydrates: 4gProtein: 9gFat: 13gSaturated Fat: 3gPolyunsaturated Fat: 1.5gMonounsaturated Fat: 7gCholesterol: 75mgSodium: 220mgPotassium: 140mgFiber: 1gSugar: 1gVitamin A: 300IUCalcium: 90mgIron: 1mg

Notes

Try brushing the tops with egg wash for a golden finish, or add your favorite toppings like sesame seeds or shredded cheese.
Store in the fridge for up to 5 days, or freeze for longer shelf life.
Reheat by toasting until crisp.

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Let us know how it was!

Why Cottage Cheese Bagels with Almond Flour?

Cottage cheese bagels with almond flour weren’t in my childhood kitchen—but the spirit behind them sure was. I grew up in San Antonio, where the sizzle of cast iron and the scent of my mom’s breakfast tacos wafting from her food truck meant the day had officially started.

Back then, bagels weren’t our go-to. But later, after long hauls in trucking and even longer days in construction, I found myself craving something hearty and easy. That’s when I stumbled across the idea of reinventing a bagel—not with traditional bread flour, but with ingredients that worked for the way I wanted to eat now.

Once I moved just outside Austin and settled into family life, cooking became more than just a necessity—it was a ritual. One morning, with a fridge full of cottage cheese and a half-used bag of almond flour, the idea sparked: what if I could recreate that comforting bagel texture with real, nourishing ingredients? No gluten, no sugar crash, just a warm, chewy bite I’d feel good sharing with my wife and kids.

Cottage cheese bagels with almond flour were born in that moment. The first batch was a little messy. But the flavor? Unbelievable. The almond flour gave it that rustic, nutty base, and the cottage cheese added a soft richness you don’t expect from something this easy.

I’ve been tweaking it ever since—adding a sprinkle of “everything” seasoning here, some smoked salt there—but the heart of it never changed. It’s about making food that feels like home, no matter what’s in your pantry.

If you’re pairing these bagels with something light and energizing, a strawberry chia seed smoothie makes the perfect clean, protein-rich combo for your morning.

Ingredients & Preparation Tips for Almond Flour Bagels

Can You Use Almond Flour for Cottage Cheese Bagels?

Yes, and it’s what makes cottage cheese bagels with almond flour so unique and satisfying. Almond flour is low-carb, gluten-free, and naturally rich, which makes it ideal for these protein-packed bagels. Unlike wheat flour, almond flour doesn’t rely on gluten for structure. Instead, it pairs beautifully with moisture-rich ingredients—like cottage cheese—to create a soft, chewy texture that’s hard to beat.

ingredients-cottage-cheese-almond-flour-bagels
Ingredients used to make almond flour cottage cheese bagels

When baking cottage cheese bagels with almond flour, you don’t need yeast or boiling steps. The almond flour gives you a rustic, nutty base, while cottage cheese keeps the interior moist and tender. Together, they form a dough that’s easy to shape and quick to bake—perfect for busy mornings or meal prep.

Let’s break it down. Almond flour behaves differently than other baking flours. Here’s how it compares:

Flour TypeTextureCarb Content (per 1/4 cup)Best Use
Almond FlourMoist, nutty, slightly coarse6gCottage cheese bagels, keto breads
All-Purpose FlourFine, elastic23gTraditional bagels and pastries
Coconut FlourDry, highly absorbent16gKeto muffins, low-carb pancakes

For those focused on clean eating and balance, these bagels go hand-in-hand with our pink salt weight loss recipe—a simple drink that supports hydration and digestion naturally.

The Role of Cottage Cheese in Bagels

Cottage cheese is the secret sauce in cottage cheese bagels with almond flour. It brings in creaminess, protein, and structure—without making the bagels dense. Almond flour can sometimes result in baked goods that crumble too easily, but when you mix it with cottage cheese, the texture balances out beautifully.

This recipe relies on the natural fat and moisture from the cheese to bind the dough and keep it light on the inside. That’s why cottage cheese bagels with almond flour stay soft and chewy, even after a couple of days in the fridge. It’s functional and flavorful all at once.

What kind should you use?

  • Full-fat cottage cheese: Perfect for ultra-moist bagels.
  • Low-fat: Still works, but may need a tablespoon of olive oil for balance.
  • Non-fat: Skip it—it doesn’t give the body this dough needs.

If your dough feels too sticky, don’t panic. Add a little extra almond flour, just a tablespoon at a time. That’s one of the joys of making cottage cheese bagels with almond flour—the dough is forgiving and flexible.

Baking Techniques for Perfect Cottage Cheese Almond Flour Bagels

What Is the Secret to Baking with Almond Flour?

If you’ve ever tried baking with almond flour and ended up with flat, soggy results—you’re not alone. But when it comes to cottage cheese bagels with almond flour, getting the right rise and chew comes down to three things: moisture control, solid binding, and balanced leavening.

First, almond flour is naturally moist. That’s a blessing for soft interiors, but it also means your dough can get sticky fast. This is why combining it with cottage cheese works so well—the cheese adds protein and body, which absorbs and evens out that moisture.

Second, always use large eggs. They help bind the almond flour and cottage cheese into a smooth dough, giving your bagels structure. Skipping them or downsizing leads to deflation—literally.

And third, don’t underestimate your leavening agents. Baking powder is key for lift. A 1:1 ratio of baking powder to flour (by tablespoons) is too much for wheat-based dough, but works beautifully here. Optional: a pinch of xanthan gum if you want a chewier finish, though it’s not required.

Many home bakers get tripped up thinking almond flour behaves like all-purpose flour. It doesn’t. You don’t need long resting times or kneading. In fact, once the dough for cottage cheese bagels with almond flour comes together, you’re better off shaping and baking right away to preserve the leavening reaction.

Pro tip: Don’t overmix. Once the batter is uniform, stop stirring. Overworked almond flour won’t develop gluten (because there isn’t any), but it can still get too soft if you beat it down.

Getting That Signature Bagel Texture Without Gluten

Now here’s the real challenge—how do you get that “real” bagel bite without traditional dough or boiling?

Luckily, cottage cheese bagels with almond flour don’t need the traditional boil-before-bake method. The high moisture in cottage cheese and richness of almond flour naturally create a tender, dense interior—just like a New York bagel, minus the chew of gluten.

To shape them:

  • Use damp hands and form dough balls first.
  • Poke a hole in the center with your thumb.
  • Gently stretch into a ring without tearing.
Shaping dough for cottage cheese almond flour bagels
Shaping the soft almond flour and cottage cheese dough into bagels

Place the rings directly onto a parchment-lined baking sheet. If you want a smoother, shinier finish, brush the tops with a beaten egg before baking.

Bake at 375°F (190°C) for 18–22 minutes, depending on your oven. You’re looking for golden edges and a slight spring when touched. Don’t overbake—almond flour darkens fast.

Here’s a quick cheat sheet:

StepTip
ShapingWet hands prevent sticking and make ring shaping easier
BrushingEgg wash helps give a crisp, glossy finish
BakingDon’t overbake—golden, not brown, is your finish line

Once baked, let your cottage cheese bagels with almond flour cool for 10 minutes before slicing. They’ll firm up as they rest, making them easier to cut and toast.

Flavor Ideas and Storage Tips

Best Add-ins & Variations for These Bagels

Served cottage cheese bagels with cream cheese and lox
Bagels made with almond flour and cottage cheese, ready to enjoy

One of the best things about making cottage cheese bagels with almond flour at home is how easy they are to customize. The base dough is mild and versatile, which makes it perfect for all kinds of mix-ins—whether you like your bagels sweet, savory, or somewhere in between.

For a savory twist, try stirring these into the dough:

  • Everything bagel seasoning (garlic, onion, sesame, poppy, salt)
  • Shredded cheddar or asiago cheese
  • Chopped chives or fresh rosemary
  • Crumbled bacon or jalapeños

Want something more sweet and wholesome?

  • A touch of cinnamon and a dash of maple extract
  • Sugar-free chocolate chips or blueberries
  • Vanilla and a sprinkle of monk fruit or coconut sugar

No matter your style, these cottage cheese bagels with almond flour are a blank canvas. You can switch things up every week without changing the base recipe. After shaping the bagels and brushing with egg wash, press toppings directly into the dough—sesame seeds, flaky salt, or even shredded cheese work great.

Storage and Reheating Made Easy

The beauty of cottage cheese bagels with almond flour is how well they store. Whether you bake them for the week or stash a few for later, they stay fresh and flavorful with just a little prep.

Here’s how to keep them at their best:

  • Room temperature: Store in an airtight container for up to 2 days.
  • Refrigerator: Keep sealed and chilled up to 5 days.
  • Freezer: Freeze bagels in a zip bag with parchment between them. Thaw overnight or toast straight from frozen.

For reheating, slice in half and toast until the edges are golden and crisp. If you’re working from frozen, use a defrost setting or a low oven to warm them gently before toasting. That combo of almond flour and cottage cheese stays moist inside and golden on the outside.

Want more prep-ahead breakfast ideas? Our sourdough discard cinnamon rolls freeze just as well and bring that same made-from-scratch comfort to your mornings.

Frequently Asked Questions

Can you use almond flour for cottage cheese bagels?

Yes, almond flour works incredibly well for making cottage cheese bagels with almond flour. It’s naturally gluten-free, low in carbs, and has a rich, nutty flavor that complements the creamy texture of cottage cheese. While almond flour doesn’t behave like traditional wheat flour, it binds beautifully when paired with eggs and dairy.

What is the secret to baking with almond flour?

The secret to baking with almond flour is balancing moisture and structure. Because almond flour is more moist and less dense than wheat flour, it benefits from protein-rich binders like eggs and cottage cheese. For cottage cheese bagels with almond flour, be careful not to overmix, and always shape the dough with damp hands to prevent sticking.

Is cottage cheese good for bagels?

Absolutely. Cottage cheese adds richness, moisture, and a mild tang that enhances the flavor of baked goods. In cottage cheese bagels with almond flour, it also plays a key role in binding the dough and keeping it from drying out. The result is a bagel that’s soft and chewy inside, crisp outside, and satisfying without feeling heavy.

What is the best flour for bagels?

Traditionally, high-gluten bread flour is used for chewy, dense bagels. But if you’re going grain-free or low-carb, almond flour is a fantastic alternative. It gives a hearty texture and a slightly sweet, nutty base—especially when paired with creamy cottage cheese. For cottage cheese bagels with almond flour, it’s the ideal choice.

Conclusion: Bringing Bagels Back to the Table

Making cottage cheese bagels with almond flour brings together everything I love about home cooking—big flavor, simple ingredients, and food that fits real life. These bagels are quick to make, easy to customize, and perfect whether you’re feeding a crowd or just fueling your morning.

You don’t need fancy equipment, a long dough rise, or a trip to a specialty bakery. With almond flour and cottage cheese, you’re just a few steps away from warm, chewy bagels that hit all the right notes.

Whether you’re keeping things classic with sesame seeds or going bold with jalapeños and cheddar, these bagels let you own your flavor. So fire up the oven, shape that dough, and make a batch that feels like home. Because around here, that’s what hearty recipes are all about—no fluff, no fuss, just food that makes memories.

Looking for more hearty, no-fuss recipes like this?
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